WormBase Tree Display for Variation: WBVar00016968
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| WBVar00016968 | Name | Public_name | WBVar00016968 | ||
|---|---|---|---|---|---|
| Other_name | haw34516 | ||||
| haw137216 | |||||
| cewivar00144687 | |||||
| CE38584:p.Leu97= | |||||
| C01G12.13.1:c.289C>T | |||||
| HGVSg | CHROMOSOME_II:g.14577377C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C01G12 | |
| Flanking_sequences | catacagtgatccatttttcagaag | tggaagatgtaacgcaaccttcagc | |||
| Mapping_target | C01G12 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Andersen | |||||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01442459 | |||
| WBVar01442460 | |||||
| WBVar00557081 | |||||
| WBVar01384954 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00044333 | |||
| Transcript | C01G12.13.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C01G12.13.1:c.289C>T | ||||
| HGVSp | CE38584:p.Leu97= | ||||
| cDNA_position | 517 | ||||
| CDS_position | 289 | ||||
| Protein_position | 97 | ||||
| Exon_number | 4/8 | ||||
| Codon_change | Ctg/Ttg | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw34516 | ||||
| Method | WGS_Hawaiian_Waterston |
