WormBase Tree Display for Variation: WBVar00017518
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| WBVar00017518 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00017518 | |||
| Other_name (12) | |||||
| HGVSg | CHROMOSOME_II:g.14652227G>C | ||||
| Sequence_details | SMap | S_parent | Sequence | C38C6 | |
| Flanking_sequences | ttatggataatagttgtaagtaaaa | tcgaaaaggcacaaaaattatatat | |||
| Mapping_target | C38C6 | ||||
| Type_of_mutation | Substitution | G | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01385108 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006787 | |||
| Transcript | ZC101.2c.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC101.2c.1:c.*331C>G | ||||
| cDNA_position | 7309 | ||||
| Exon_number | 24/24 | ||||
| ZC101.2f.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC101.2f.1:c.*331C>G | ||||
| cDNA_position | 7592 | ||||
| Exon_number | 24/24 | ||||
| ZC101.2j.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC101.2j.1:c.*331C>G | ||||
| cDNA_position | 7201 | ||||
| Exon_number | 23/23 | ||||
| ZC101.2o.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC101.2o.1:c.*331C>G | ||||
| cDNA_position | 7771 | ||||
| Exon_number | 25/25 | ||||
| ZC101.2n.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC101.2n.1:c.*331C>G | ||||
| cDNA_position | 7498 | ||||
| Exon_number | 24/24 | ||||
| ZC101.2d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC101.2d.1:c.9424+456C>G | ||||
| Intron_number | 34/45 | ||||
| ZC101.2e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC101.2e.1:c.7324+456C>G | ||||
| Intron_number | 24/34 | ||||
| ZC101.2m.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC101.2m.1:c.*331C>G | ||||
| cDNA_position | 7483 | ||||
| Exon_number | 24/24 | ||||
| ZC101.2a.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC101.2a.1:c.*331C>G | ||||
| cDNA_position | 7871 | ||||
| Exon_number | 26/26 | ||||
| ZC101.2i.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC101.2i.1:c.*331C>G | ||||
| cDNA_position | 7013 | ||||
| Exon_number | 23/23 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw34626 | ||||
| Method | WGS_Hawaiian_Waterston |
