WormBase Tree Display for Variation: WBVar00019743
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| WBVar00019743 | Name | Public_name | WBVar00019743 | ||
|---|---|---|---|---|---|
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_II:g.14945079T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | E01F3 | |
| Flanking_sequences | ttccagttggcaacttttataaaaa | taagtaattcaggagttattgcctg | |||
| Mapping_target | E01F3 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00557507 | |||
| WBVar01385807 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00008443 | |||
| Transcript | E01F3.1f.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | E01F3.1f.1:c.304-138T>C | ||||
| Intron_number | 2/10 | ||||
| E01F3.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | E01F3.1h.1:c.292-138T>C | ||||
| Intron_number | 2/11 | ||||
| E01F3.1j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | E01F3.1j.1:c.445-138T>C | ||||
| Intron_number | 3/11 | ||||
| E01F3.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | E01F3.1g.1:c.304-138T>C | ||||
| Intron_number | 3/12 | ||||
| E01F3.1i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | E01F3.1i.1:c.604-138T>C | ||||
| Intron_number | 4/12 | ||||
| E01F3.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | E01F3.1b.1:c.445-138T>C | ||||
| Intron_number | 5/14 | ||||
| E01F3.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | E01F3.1c.1:c.292-138T>C | ||||
| Intron_number | 2/11 | ||||
| E01F3.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | E01F3.1e.1:c.604-138T>C | ||||
| Intron_number | 4/12 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw35071 | ||||
| Method | WGS_Hawaiian_Waterston |
