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WormBase Tree Display for Variation: WBVar00020103

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Name Class

WBVar00020103EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00020103
Other_namehaw35143
cewivar00102116
Y53F4B.4a.3:c.456+363G>A
Y53F4B.4a.2:c.456+363G>A
Y53F4B.4c.1:c.726+363G>A
Y53F4B.4b.1:c.918+363G>A
Y53F4B.4a.1:c.456+363G>A
HGVSgCHROMOSOME_II:g.14975287G>A
Sequence_detailsSMapS_parentSequenceY53F4B
Flanking_sequencestcagaaaaaatcaggcaaaatctgaaagtcagaaaattttgaaaaaatta
Mapping_targetY53F4B
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (27)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01385912
WBVar01254054
WBVar01321526
StatusLive
AffectsGeneWBGene00013151
TranscriptY53F4B.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.4a.1:c.456+363G>A
Intron_number6/8
Y53F4B.4a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.4a.3:c.456+363G>A
Intron_number4/6
Y53F4B.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.4b.1:c.918+363G>A
Intron_number5/6
Y53F4B.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.4c.1:c.726+363G>A
Intron_number4/5
Y53F4B.4a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.4a.2:c.456+363G>A
Intron_number5/7
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw35143
MethodWGS_Hawaiian_Waterston