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WormBase Tree Display for Variation: WBVar00020128

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Name Class

WBVar00020128EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00020128
Other_namehaw35148
cewivar00123830
Y53F4B.4a.3:c.574-249T>A
Y53F4B.4b.1:c.1036-249T>A
Y53F4B.4a.1:c.574-249T>A
Y53F4B.4c.1:c.844-249T>A
Y53F4B.4a.2:c.574-249T>A
HGVSgCHROMOSOME_II:g.14976365T>A
Sequence_detailsSMapS_parentSequenceY53F4B
Flanking_sequencesttttaattgaaaaatatttttttttaattcattaaattttcagcttacac
Mapping_targetY53F4B
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (18)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01254059
WBVar01385917
StatusLive
AffectsGeneWBGene00013151
TranscriptY53F4B.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.4a.1:c.574-249T>A
Intron_number7/8
Y53F4B.4a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.4a.3:c.574-249T>A
Intron_number5/6
Y53F4B.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.4b.1:c.1036-249T>A
Intron_number6/6
Y53F4B.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.4c.1:c.844-249T>A
Intron_number5/5
Y53F4B.4a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.4a.2:c.574-249T>A
Intron_number6/7
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw35148
MethodWGS_Hawaiian_Waterston