WormBase Tree Display for Variation: WBVar00020128
expand all nodes | collapse all nodes | view schema
WBVar00020128 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00020128 | |||
Other_name | haw35148 | ||||
cewivar00123830 | |||||
Y53F4B.4a.3:c.574-249T>A | |||||
Y53F4B.4b.1:c.1036-249T>A | |||||
Y53F4B.4a.1:c.574-249T>A | |||||
Y53F4B.4c.1:c.844-249T>A | |||||
Y53F4B.4a.2:c.574-249T>A | |||||
HGVSg | CHROMOSOME_II:g.14976365T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y53F4B | |
Flanking_sequences | ttttaattgaaaaatattttttttt | aattcattaaattttcagcttacac | |||
Mapping_target | Y53F4B | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (18) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01254059 | |||
WBVar01385917 | |||||
Status | Live | ||||
Affects | Gene | WBGene00013151 | |||
Transcript | Y53F4B.4a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y53F4B.4a.1:c.574-249T>A | ||||
Intron_number | 7/8 | ||||
Y53F4B.4a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y53F4B.4a.3:c.574-249T>A | ||||
Intron_number | 5/6 | ||||
Y53F4B.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y53F4B.4b.1:c.1036-249T>A | ||||
Intron_number | 6/6 | ||||
Y53F4B.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y53F4B.4c.1:c.844-249T>A | ||||
Intron_number | 5/5 | ||||
Y53F4B.4a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y53F4B.4a.2:c.574-249T>A | ||||
Intron_number | 6/7 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw35148 | ||||
Method | WGS_Hawaiian_Waterston |