WormBase Tree Display for Variation: WBVar00020301
expand all nodes | collapse all nodes | view schema
WBVar00020301 | Name | Public_name | WBVar00020301 | ||
---|---|---|---|---|---|
Other_name | pas15657 | ||||
cewivar00019347 | |||||
CE26979:p.Pro309= | |||||
R06B10.3.1:c.927G>T | |||||
HGVSg | CHROMOSOME_III:g.1006008G>T | ||||
Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_III | |
Flanking_sequences | aaactgtatttaggttttcttattattttttagttaaaacttgaaaaatagggtaattaattcgtttcacatcaactttttcgattttatttgaaattaattttcacagatagctatgatatttttgcaacttttaatctataatttagctaaaacatctcaaaaactagaaaaactttaaaactcaaattttagcgcaataaccggtgctcaaaagtttcggtgggtcccatcgatgaacaacatcggctacactacgttggtatttttgacggctcgccgcgatttttccggaattcc | tcacttttccagccattcccaaagttcgatgaagtcgtcgtaatatccttgaatggtatgggttactgtagttgagttgcaggtgattacggtagtttcagggtcccaaatgccaggaatcccggctggagtcaaaaatgtcgcggtttcgaatgatttcagcagtacggatattcaaaatgttatcaatgttttaaaatgtcattaatttttaataaatttgactattttaccatagaattcgaaaaatgttgtcctaaattagtttcctcgtcggtttttcaagtttttcacctaaaa | |||
Mapping_target | CHROMOSOME_III | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00019914 | |||
Transcript | R06B10.3.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | R06B10.3.1:c.927G>T | ||||
HGVSp | CE26979:p.Pro309= | ||||
cDNA_position | 947 | ||||
CDS_position | 927 | ||||
Protein_position | 309 | ||||
Exon_number | 9/11 | ||||
Codon_change | ccG/ccT | ||||
Amino_acid_change | P | ||||
Method | WGS_Pasadena_Quinlan |