WormBase Tree Display for Variation: WBVar00020555
expand all nodes | collapse all nodes | view schema
| WBVar00020555 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00020555 | |||
| Other_name | haw85209 | ||||
| haw171668 | |||||
| cewivar00245485 | |||||
| C29F3.7a.1:c.1287-320G>A | |||||
| C29F3.7b.1:c.1185-320G>A | |||||
| HGVSg | CHROMOSOME_V:g.15357002G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C29F3 | |
| Flanking_sequences | ttctggaaaacaattaaataacttt | ccaaaagcaaaaagtaaaaaaggtg | |||
| Mapping_target | C29F3 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00591533 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00007807 | |||
| Transcript | C29F3.7a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C29F3.7a.1:c.1287-320G>A | ||||
| Intron_number | 7/8 | ||||
| C29F3.7b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C29F3.7b.1:c.1185-320G>A | ||||
| Intron_number | 6/6 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw85209 | ||||
| Method | WGS_Hawaiian_Waterston |
