WormBase Tree Display for Variation: WBVar00020625
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WBVar00020625 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00020625 | |||
Other_name | haw85223 | ||||
haw171673 | |||||
cewivar00245499 | |||||
C29F3.1.2:c.*53T>A | |||||
C29F3.1.1:c.*53T>A | |||||
HGVSg | CHROMOSOME_V:g.15357739A>T | ||||
Sequence_details | SMap | S_parent | Sequence | C29F3 | |
Flanking_sequences | gcaatttgaaaggaaattcattgaa | acaaaaatgtcccgtataagctgtg | |||
Mapping_target | C29F3 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00591538 | |||
Status | Live | ||||
Affects | Gene | WBGene00001150 | |||
Transcript | C29F3.1.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C29F3.1.1:c.*53T>A | ||||
cDNA_position | 2321 | ||||
Exon_number | 6/6 | ||||
C29F3.1.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C29F3.1.2:c.*53T>A | ||||
cDNA_position | 2444 | ||||
Exon_number | 7/7 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw85223 | ||||
Method | WGS_Hawaiian_Waterston |