WormBase Tree Display for Variation: WBVar00021313
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WBVar00021313 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00021313 | |||
Other_name | haw35385 | ||||
cewivar00145612 | |||||
CE48759:p.Val25= | |||||
Y53F4B.23.1:c.75G>A | |||||
HGVSg | CHROMOSOME_II:g.15124637G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y53F4B | |
Flanking_sequences | caactgtctataaagttaggaaggt | attcggaggtgagatggattaataa | |||
Mapping_target | Y53F4B | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01386271 | |||
Status | Live | ||||
Affects | Gene | WBGene00013169 | |||
Transcript | Y53F4B.23.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y53F4B.23.1:c.75G>A | ||||
HGVSp | CE48759:p.Val25= | ||||
cDNA_position | 134 | ||||
CDS_position | 75 | ||||
Protein_position | 25 | ||||
Exon_number | 2/6 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw35385 | ||||
Method | WGS_Hawaiian_Waterston |