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WormBase Tree Display for Variation: WBVar00021623

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Name Class

WBVar00021623NamePublic_nameWBVar00021623
Other_namehaw35447
haw137915
cewivar00145691
Y53F4B.31.2:c.140-109T>A
Y53F4B.31.1:c.140-109T>A
HGVSgCHROMOSOME_II:g.15166870A>T
Sequence_detailsSMapS_parentSequenceY53F4B
Flanking_sequencesaagttgtaaaagtttctagaaaaaatttttagattaaaattcgaatccca
Mapping_targetY53F4B
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00557780
WBVar01386389
WBVar01321993
StatusLive
AffectsGeneWBGene00001776
TranscriptY53F4B.31.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.31.1:c.140-109T>A
Intron_number2/3
Y53F4B.31.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.31.2:c.140-109T>A
Intron_number3/4
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw35447
MethodWGS_Hawaiian_Waterston