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WormBase Tree Display for Variation: WBVar00022043

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Name Class

WBVar00022043NamePublic_nameWBVar00022043
Other_name (11)
HGVSgCHROMOSOME_II:g.15222022A>G
Sequence_detailsSMapS_parentSequenceY46E12BL
Flanking_sequencestttttcatacatttcccccctattctgagtgtcgaaaaatgaaaaaatgg
Mapping_targetY46E12BL
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01386530
WBVar00557845
StatusLive
AffectsGeneWBGene00021597
TranscriptY46E12BL.4h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4h.1:c.649-803A>G
Intron_number2/5
Y46E12BL.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4f.1:c.304-809A>G
Intron_number2/5
Y46E12BL.4i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4i.1:c.439-803A>G
Intron_number4/7
Y46E12BL.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4c.1:c.649-809A>G
Intron_number3/7
Y46E12BL.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4b.1:c.304-803A>G
Intron_number2/6
Y46E12BL.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4e.1:c.487-803A>G
Intron_number2/5
Y46E12BL.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4a.1:c.304-809A>G
Intron_number2/4
Y46E12BL.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4g.1:c.487-809A>G
Intron_number2/5
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw35531
MethodWGS_Hawaiian_Waterston