WormBase Tree Display for Variation: WBVar00023163
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| WBVar00023163 | Name | Public_name | WBVar00023163 | ||
|---|---|---|---|---|---|
| Other_name | haw35755 | ||||
| haw138115 | |||||
| cewivar00189772 | |||||
| H10E21.3b.1:c.1455G>A | |||||
| H10E21.3a.1:c.1401G>A | |||||
| CE19488:p.Gly485= | |||||
| CE28733:p.Gly467= | |||||
| HGVSg | CHROMOSOME_III:g.12249C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | H10E21 | |
| Flanking_sequences | cattattattattaacaacattaat | ccattccgcatcgcccgtttctcgg | |||
| Mapping_target | H10E21 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00557980 | |||
| WBVar01386803 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003670 | |||
| Transcript | H10E21.3b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | H10E21.3b.1:c.1455G>A | ||||
| HGVSp | CE19488:p.Gly485= | ||||
| cDNA_position | 1455 | ||||
| CDS_position | 1455 | ||||
| Protein_position | 485 | ||||
| Exon_number | 6/7 | ||||
| Codon_change | ggG/ggA | ||||
| Amino_acid_change | G | ||||
| H10E21.3a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | H10E21.3a.1:c.1401G>A | ||||
| HGVSp | CE28733:p.Gly467= | ||||
| cDNA_position | 1517 | ||||
| CDS_position | 1401 | ||||
| Protein_position | 467 | ||||
| Exon_number | 8/9 | ||||
| Codon_change | ggG/ggA | ||||
| Amino_acid_change | G | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw35755 | ||||
| Method | WGS_Hawaiian_Waterston |
