WormBase Tree Display for Variation: WBVar00023253
expand all nodes | collapse all nodes | view schema
| WBVar00023253 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00023253 | |||
| Other_name | haw35773 | ||||
| cewivar00145957 | |||||
| CE28733:p.Ser7Pro | |||||
| CE19488:p.Ser25Pro | |||||
| H10E21.3b.1:c.73T>C | |||||
| H10E21.3a.1:c.19T>C | |||||
| HGVSg | CHROMOSOME_III:g.14681A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | H10E21 | |
| Flanking_sequences | caaattagacatcgcgtggagctgg | agaagctggaaatcggaattttgat | |||
| Mapping_target | H10E21 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01386851 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00003670 | |||
| Transcript | H10E21.3b.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | H10E21.3b.1:c.73T>C | ||||
| HGVSp | CE19488:p.Ser25Pro | ||||
| cDNA_position | 73 | ||||
| CDS_position | 73 | ||||
| Protein_position | 25 | ||||
| Exon_number | 1/7 | ||||
| Codon_change | Tcc/Ccc | ||||
| Amino_acid_change | S/P | ||||
| H10E21.3a.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | H10E21.3a.1:c.19T>C | ||||
| HGVSp | CE28733:p.Ser7Pro | ||||
| cDNA_position | 135 | ||||
| CDS_position | 19 | ||||
| Protein_position | 7 | ||||
| Exon_number | 3/9 | ||||
| Codon_change | Tcc/Ccc | ||||
| Amino_acid_change | S/P | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw35773 | ||||
| Method | WGS_Hawaiian_Waterston |
