WormBase Tree Display for Variation: WBVar00023910
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WBVar00023910 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00023910 | |||
Other_name | haw85880 | ||||
haw172119 | |||||
cewivar00246615 | |||||
Y6E2A.8.1:c.129T>C | |||||
CE51893:p.Gly43= | |||||
HGVSg | CHROMOSOME_V:g.15726526A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y6E2A | |
Flanking_sequences | aatagtctgaaataaccaacggaaa | ccaatcacttcttcacatcccatcg | |||
Mapping_target | Y6E2A | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00591984 | |||
Status | Live | ||||
Affects | Gene | WBGene00012401 | |||
Transcript | Y6E2A.8.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y6E2A.8.1:c.129T>C | ||||
HGVSp | CE51893:p.Gly43= | ||||
cDNA_position | 137 | ||||
CDS_position | 129 | ||||
Protein_position | 43 | ||||
Exon_number | 3/8 | ||||
Codon_change | ggT/ggC | ||||
Amino_acid_change | G | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw85880 | ||||
Method | WGS_Hawaiian_Waterston |