WormBase Tree Display for Variation: WBVar00025758
expand all nodes | collapse all nodes | view schema
WBVar00025758 | Name | Public_name | WBVar00025758 | ||
---|---|---|---|---|---|
Other_name | haw36274 | ||||
haw138544 | |||||
cewivar00190741 | |||||
F54C4.3.1:c.2161+311T>C | |||||
HGVSg | CHROMOSOME_III:g.77963A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F54C4 | |
Flanking_sequences | agattttctgaaattccaaagcttc | aaccgaaatttgttcagagataatt | |||
Mapping_target | F54C4 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01387628 | |||
WBVar00558409 | |||||
Status | Live | ||||
Affects | Gene | WBGene00018794 | |||
Transcript | F54C4.3.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F54C4.3.1:c.2161+311T>C | ||||
Intron_number | 14/19 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw36274 | ||||
Method | WGS_Hawaiian_Waterston |