WormBase Tree Display for Variation: WBVar00025945
expand all nodes | collapse all nodes | view schema
WBVar00025945 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00025945 | |||
Other_name | haw86287 | ||||
cewivar00247645 | |||||
T06C12.2.1:c.-382G>T | |||||
HGVSg | CHROMOSOME_V:g.15870788G>T | ||||
Sequence_details | SMap | S_parent | Sequence | T06C12 | |
Flanking_sequences | ttctgaattaaaatttcaacgtttt | ttgctttattttgttatttcaaaca | |||
Mapping_target | T06C12 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
WBStrain00006697 | From_analysis | WGS_Andersen | |||
WBStrain00006698 | From_analysis | WGS_Andersen | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | |||||
WBStrain00023079 | From_analysis | WGS_Andersen | |||
WBStrain00023084 | From_analysis | WGS_Andersen | |||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01463637 | |||
Status | Live | ||||
Affects | Gene | WBGene00006122 | |||
Transcript | T06C12.2.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T06C12.2.1:c.-382G>T | ||||
cDNA_position | 133 | ||||
Exon_number | 1/5 | ||||
Reference | WBPaper00040707 | ||||
Remark | [20081124 db] this Variation was previously named hw86287 | ||||
Method | WGS_Hawaiian_Waterston |