WormBase Tree Display for Variation: WBVar00026249

WBVar00026249 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00026249
    Other_name: cbs22770
      cb22770 Paper_evidence: WBPaper00055507
    HGVSg: chrII:g.541859T>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0022b
    Flanking_sequences: attccgacgaataggatttcaatga cccagattgatcccgattcgccacg
    Mapping_target: cb25.fpc0022b
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (17)
      Polymorphic_strain_digest (17)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00024248
    Transcript: CBG00943a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG00943a.1:c.863-1566A>G
        Intron_number: 5/9
      CBG00943b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG00943b.1:c.713-1566A>G
        Intron_number: 5/9
      CBG00943c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG00943c.1:c.818-1566A>G
        Intron_number: 5/9
      CBG00943d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG00943d.1:c.794-1566A>G
        Intron_number: 6/9
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP