WormBase Tree Display for Variation: WBVar00026870
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| WBVar00026870 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00026870 | |||
| Other_name | haw86472 | ||||
| haw172567 | |||||
| cewivar00248040 | |||||
| CE15959:p.Cys26= | |||||
| F35E8.9.1:c.78C>T | |||||
| HGVSg | CHROMOSOME_V:g.15917481G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F35E8 | |
| Flanking_sequences | ttacagcagttccattgtaggttgt | cagttaagatctcctccgataacag | |||
| Mapping_target | F35E8 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00592432 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00009422 | |||
| Transcript | F35E8.9.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F35E8.9.1:c.78C>T | ||||
| HGVSp | CE15959:p.Cys26= | ||||
| cDNA_position | 78 | ||||
| CDS_position | 78 | ||||
| Protein_position | 26 | ||||
| Exon_number | 1/3 | ||||
| Codon_change | tgC/tgT | ||||
| Amino_acid_change | C | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw86472 | ||||
| Method | WGS_Hawaiian_Waterston |
