WormBase Tree Display for Variation: WBVar00027200
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| WBVar00027200 | Name | Public_name | WBVar00027200 | ||
|---|---|---|---|---|---|
| Other_name | haw86538 | ||||
| cewivar00248191 | |||||
| F35E8.12.2:c.492T>C | |||||
| F35E8.12.1:c.492T>C | |||||
| F35E8.13.1:c.-160+453A>G | |||||
| CE15962:p.Ser164= | |||||
| HGVSg | CHROMOSOME_V:g.15923782A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F35E8 | |
| Flanking_sequences | gtgaaaatcgaataatgaagtgggt | gataaaaccttattttgattgtttt | |||
| Mapping_target | F35E8 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00009424 | |||
| WBGene00003698 | |||||
| Transcript | F35E8.12.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F35E8.12.1:c.492T>C | ||||
| HGVSp | CE15962:p.Ser164= | ||||
| cDNA_position | 560 | ||||
| CDS_position | 492 | ||||
| Protein_position | 164 | ||||
| Exon_number | 4/7 | ||||
| Codon_change | tcT/tcC | ||||
| Amino_acid_change | S | ||||
| F35E8.12.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F35E8.12.2:c.492T>C | ||||
| HGVSp | CE15962:p.Ser164= | ||||
| cDNA_position | 559 | ||||
| CDS_position | 492 | ||||
| Protein_position | 164 | ||||
| Exon_number | 4/8 | ||||
| Codon_change | tcT/tcC | ||||
| Amino_acid_change | S | ||||
| F35E8.13.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F35E8.13.1:c.-160+453A>G | ||||
| Intron_number | 1/5 | ||||
| Remark | [20081124 db] this Variation was previously named hw86538 | ||||
| Method | WGS_Hawaiian_Waterston |
