WormBase Tree Display for Variation: WBVar00027900
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| WBVar00027900 | Name | Public_name | WBVar00027900 | ||
|---|---|---|---|---|---|
| Other_name | haw86678 | ||||
| cewivar00248545 | |||||
| CE34992:p.Thr223= | |||||
| T05G11.6.1:c.669A>C | |||||
| HGVSg | CHROMOSOME_V:g.15939504T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | T05G11 | |
| Flanking_sequences | gaattaaccaaactgtagcaaatgt | gtcataaaagatggtattactcgaa | |||
| Mapping_target | T05G11 | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00005802 | |||
| Transcript | T05G11.6.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | T05G11.6.1:c.669A>C | ||||
| HGVSp | CE34992:p.Thr223= | ||||
| cDNA_position | 669 | ||||
| CDS_position | 669 | ||||
| Protein_position | 223 | ||||
| Exon_number | 3/4 | ||||
| Codon_change | acA/acC | ||||
| Amino_acid_change | T | ||||
| Remark | [20081124 db] this Variation was previously named hw86678 | ||||
| Method | WGS_Hawaiian_Waterston |
