WormBase Tree Display for Variation: WBVar00028335
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| WBVar00028335 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00028335 | |||
| Other_name | haw86765 | ||||
| haw172729 | |||||
| cewivar00248766 | |||||
| F36G9.3b.1:c.240C>T | |||||
| CE42885:p.Cys80= | |||||
| CE48057:p.Cys80= | |||||
| F36G9.3a.1:c.240C>T | |||||
| HGVSg | CHROMOSOME_V:g.15957835C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F36G9 | |
| Flanking_sequences | ctttgacaccaaaatgggcaatgtg | attggagctctttgttatgcgagtt | |||
| Mapping_target | F36G9 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00592594 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00009485 | |||
| Transcript | F36G9.3a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F36G9.3a.1:c.240C>T | ||||
| HGVSp | CE42885:p.Cys80= | ||||
| cDNA_position | 256 | ||||
| CDS_position | 240 | ||||
| Protein_position | 80 | ||||
| Exon_number | 3/11 | ||||
| Codon_change | tgC/tgT | ||||
| Amino_acid_change | C | ||||
| F36G9.3b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F36G9.3b.1:c.240C>T | ||||
| HGVSp | CE48057:p.Cys80= | ||||
| cDNA_position | 264 | ||||
| CDS_position | 240 | ||||
| Protein_position | 80 | ||||
| Exon_number | 3/11 | ||||
| Codon_change | tgC/tgT | ||||
| Amino_acid_change | C | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw86765 | ||||
| Method | WGS_Hawaiian_Waterston |
