WormBase Tree Display for Variation: WBVar00029610
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WBVar00029610 | Name | Public_name | WBVar00029610 | ||
---|---|---|---|---|---|
Other_name | haw87020 | ||||
cewivar00249268 | |||||
C06C6.5a.2:c.324A>G | |||||
C06C6.5a.1:c.324A>G | |||||
C06C6.5a.3:c.324A>G | |||||
CE15599:p.Ser108= | |||||
HGVSg | CHROMOSOME_V:g.15998936T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C06C6 | |
Flanking_sequences | atgagcagtcgcgaggaattattct | gactggaaaaatttttcattttttt | |||
Mapping_target | C06C6 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003640 | |||
Transcript | C06C6.5a.2 | VEP_consequence | splice_region_variant,synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C06C6.5a.2:c.324A>G | ||||
HGVSp | CE15599:p.Ser108= | ||||
cDNA_position | 523 | ||||
CDS_position | 324 | ||||
Protein_position | 108 | ||||
Exon_number | 5/9 | ||||
Codon_change | tcA/tcG | ||||
Amino_acid_change | S | ||||
C06C6.5a.1 | VEP_consequence | splice_region_variant,synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C06C6.5a.1:c.324A>G | ||||
HGVSp | CE15599:p.Ser108= | ||||
cDNA_position | 499 | ||||
CDS_position | 324 | ||||
Protein_position | 108 | ||||
Exon_number | 5/9 | ||||
Codon_change | tcA/tcG | ||||
Amino_acid_change | S | ||||
C06C6.5a.3 | VEP_consequence | splice_region_variant,synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C06C6.5a.3:c.324A>G | ||||
HGVSp | CE15599:p.Ser108= | ||||
cDNA_position | 1302 | ||||
CDS_position | 324 | ||||
Protein_position | 108 | ||||
Exon_number | 4/8 | ||||
Codon_change | tcA/tcG | ||||
Amino_acid_change | S | ||||
Remark | [20081124 db] this Variation was previously named hw87020 | ||||
Method | WGS_Hawaiian_Waterston |