WormBase Tree Display for Variation: WBVar00030128
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WBVar00030128 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00030128 | |||
Other_name | haw37148 | ||||
cewivar00192194 | |||||
CE29125:p.Ile531= | |||||
Y55B1BR.4.1:c.1593T>A | |||||
HGVSg | CHROMOSOME_III:g.464977A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y55B1BR | |
Flanking_sequences | tagtagtatctagatcaacatttcg | ataatcgcatcacaataaccacgat | |||
Mapping_target | Y55B1BR | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01389097 | |||
Status | Live | ||||
Affects | Gene | WBGene00021914 | |||
Transcript | Y55B1BR.4.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y55B1BR.4.1:c.1593T>A | ||||
HGVSp | CE29125:p.Ile531= | ||||
cDNA_position | 1600 | ||||
CDS_position | 1593 | ||||
Protein_position | 531 | ||||
Exon_number | 10/11 | ||||
Codon_change | atT/atA | ||||
Amino_acid_change | I | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw37148 | ||||
Method | WGS_Hawaiian_Waterston |