WormBase Tree Display for Variation: WBVar00030443
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WBVar00030443 | Name | Public_name | WBVar00030443 | ||
---|---|---|---|---|---|
Other_name | haw37211 | ||||
haw139284 | |||||
cewivar00017457 | |||||
B0353.1b.1:c.109-3087T>A | |||||
B0353.1c.1:c.-36-3087T>A | |||||
B0353.1a.1:c.27+2300T>A | |||||
HGVSg | CHROMOSOME_III:g.562473T>A | ||||
Sequence_details | SMap | S_parent | Sequence | B0353 | |
Flanking_sequences | tgaatttgagaaatttctgaaaaat | acaaaaaaaaattaatatggaaaaa | |||
Mapping_target | B0353 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (20) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00559149 | |||
WBVar01389191 | |||||
Status | Live | ||||
Affects | Gene | WBGene00015155 | |||
Transcript | B0353.1c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | B0353.1c.1:c.-36-3087T>A | ||||
Intron_number | 1/10 | ||||
B0353.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0353.1b.1:c.109-3087T>A | ||||
Intron_number | 2/10 | ||||
B0353.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0353.1a.1:c.27+2300T>A | ||||
Intron_number | 2/10 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw37211 | ||||
Method | WGS_Hawaiian_Waterston |