WormBase Tree Display for Variation: WBVar00031478
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| WBVar00031478 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00031478 | |||
| Other_name | haw37418 | ||||
| cewivar00192301 | |||||
| T17H7.4b.1:c.88-580C>T | |||||
| T17H7.4j.1:c.247-580C>T | |||||
| T17H7.4a.1:c.88-580C>T | |||||
| T17H7.4g.1:c.-684-580C>T | |||||
| T17H7.4c.1:c.88-580C>T | |||||
| HGVSg | CHROMOSOME_III:g.743762G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T17H7 | |
| Flanking_sequences | tgtttaatcattttttccaaaacta | agaagttaccttttattaaaaatat | |||
| Mapping_target | T17H7 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01389504 | |||
| WBVar01255066 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003936 | |||
| Transcript | T17H7.4g.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T17H7.4g.1:c.-684-580C>T | ||||
| Intron_number | 2/18 | ||||
| T17H7.4c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T17H7.4c.1:c.88-580C>T | ||||
| Intron_number | 1/17 | ||||
| T17H7.4b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T17H7.4b.1:c.88-580C>T | ||||
| Intron_number | 1/15 | ||||
| T17H7.4j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T17H7.4j.1:c.247-580C>T | ||||
| Intron_number | 4/20 | ||||
| T17H7.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T17H7.4a.1:c.88-580C>T | ||||
| Intron_number | 2/18 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw37418 | ||||
| Method | WGS_Hawaiian_Waterston |
