WormBase Tree Display for Variation: WBVar00032130
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| WBVar00032130 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00032130 | |||
| Other_name | haw87524 | ||||
| haw173186 | |||||
| cewivar00250090 | |||||
| CE16231:p.Glu303= | |||||
| K05D4.6b.2:c.549A>G | |||||
| CE46089:p.Glu183= | |||||
| K05D4.6b.1:c.549A>G | |||||
| K05D4.6a.1:c.909A>G | |||||
| HGVSg | CHROMOSOME_V:g.16186821A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | K05D4 | |
| Flanking_sequences | tctacttccatgctccataccagga | ttctgcgcaaaactgttctgcagga | |||
| Mapping_target | K05D4 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00593051 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00005482 | |||
| Transcript | K05D4.6a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | K05D4.6a.1:c.909A>G | ||||
| HGVSp | CE16231:p.Glu303= | ||||
| cDNA_position | 909 | ||||
| CDS_position | 909 | ||||
| Protein_position | 303 | ||||
| Exon_number | 4/4 | ||||
| Codon_change | gaA/gaG | ||||
| Amino_acid_change | E | ||||
| K05D4.6b.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | K05D4.6b.2:c.549A>G | ||||
| HGVSp | CE46089:p.Glu183= | ||||
| cDNA_position | 922 | ||||
| CDS_position | 549 | ||||
| Protein_position | 183 | ||||
| Exon_number | 5/5 | ||||
| Codon_change | gaA/gaG | ||||
| Amino_acid_change | E | ||||
| K05D4.6b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | K05D4.6b.1:c.549A>G | ||||
| HGVSp | CE46089:p.Glu183= | ||||
| cDNA_position | 3516 | ||||
| CDS_position | 549 | ||||
| Protein_position | 183 | ||||
| Exon_number | 4/5 | ||||
| Codon_change | gaA/gaG | ||||
| Amino_acid_change | E | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw87524 | ||||
| Method | WGS_Hawaiian_Waterston |
