WormBase Tree Display for Variation: WBVar00032500
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| WBVar00032500 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00032500 | |||
| Other_name | haw87598 | ||||
| haw173234 | |||||
| cewivar00250314 | |||||
| F11A5.5a.1:c.-17C>T | |||||
| F11A5.5b.1:c.-17C>T | |||||
| HGVSg | CHROMOSOME_V:g.16198433C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F11A5 | |
| Flanking_sequences | attatttttggatattgattttctt | gcttcttgcttttcatatggctact | |||
| Mapping_target | F11A5 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00593099 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00008673 | |||
| Transcript | F11A5.5a.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F11A5.5a.1:c.-17C>T | ||||
| cDNA_position | 118 | ||||
| Exon_number | 1/11 | ||||
| F11A5.5b.1 | VEP_consequence | 5_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F11A5.5b.1:c.-17C>T | ||||
| cDNA_position | 116 | ||||
| Exon_number | 1/11 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw87598 | ||||
| Method | WGS_Hawaiian_Waterston |
