WormBase Tree Display for Variation: WBVar00033025
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| WBVar00033025 | Name | Public_name | WBVar00033025 | ||
|---|---|---|---|---|---|
| Other_name | haw87703 | ||||
| cewivar00250597 | |||||
| F11A5.9.1:c.1380C>T | |||||
| CE47471:p.Val460= | |||||
| HGVSg | CHROMOSOME_V:g.16217222C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F11A5 | |
| Flanking_sequences | acgagtggtggtgggtatggatggt | cactttgtcacacttttcgtcttca | |||
| Mapping_target | F11A5 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00008677 | |||
| Transcript | F11A5.9.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F11A5.9.1:c.1380C>T | ||||
| HGVSp | CE47471:p.Val460= | ||||
| cDNA_position | 1389 | ||||
| CDS_position | 1380 | ||||
| Protein_position | 460 | ||||
| Exon_number | 6/7 | ||||
| Codon_change | gtC/gtT | ||||
| Amino_acid_change | V | ||||
| Remark | [20081124 db] this Variation was previously named hw87703 | ||||
| Method | WGS_Hawaiian_Waterston |
