Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00035228

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00035228NamePublic_nameWBVar00035228
Other_namehaw38168
haw139977
F58B6.3b.1:c.196-737A>T
F58B6.3e.1:c.-1069+194A>T
F58B6.3a.1:c.333+194A>T
F58B6.3e.3:c.-1069+194A>T
F58B6.3e.2:c.-1069+194A>T
F58B6.3d.1:c.333+194A>T
HGVSgCHROMOSOME_III:g.1083325A>T
Sequence_detailsSMapS_parentSequenceF58B6
Flanking_sequencestttcctcaaaattttgaattttgtgctaaaaattgcattttcagccataa
Mapping_targetF58B6
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00022850From_analysisWGS_De_Bono
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
HistoryAcquires_mergeWBVar01256169
WBVar01323558
WBVar00559842
WBVar01390567
StatusLive
AffectsGeneWBGene00305464
WBGene00003917
TranscriptF58B6.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3e.1:c.-1069+194A>T
Intron_number3/12
F58B6.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3b.1:c.196-737A>T
Intron_number3/11
F58B6.10
F58B6.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3d.1:c.333+194A>T
Intron_number4/10
F58B6.3e.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3e.2:c.-1069+194A>T
Intron_number2/11
F58B6.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3a.1:c.333+194A>T
Intron_number4/12
F58B6.3e.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3e.3:c.-1069+194A>T
Intron_number1/10
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw38168
MethodWGS_Hawaiian_Waterston