WormBase Tree Display for Variation: WBVar00035268
expand all nodes | collapse all nodes | view schema
WBVar00035268 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00035268 | |||
Other_name | haw38176 | ||||
cewivar00192938 | |||||
F58B6.3e.2:c.-872+51G>A | |||||
F58B6.3d.1:c.530+51G>A | |||||
F58B6.3a.1:c.530+51G>A | |||||
F58B6.3e.3:c.-872+51G>A | |||||
F58B6.3e.1:c.-872+51G>A | |||||
F58B6.3b.1:c.392+51G>A | |||||
HGVSg | CHROMOSOME_III:g.1084512G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F58B6 | |
Flanking_sequences | aaaggctgaaaatctggaaatttca | ctaaaaatatggaaaaatcgctgaa | |||
Mapping_target | F58B6 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01390575 | |||
Status | Live | ||||
Affects | Gene | WBGene00003917 | |||
Transcript | F58B6.3e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F58B6.3e.1:c.-872+51G>A | ||||
Intron_number | 5/12 | ||||
F58B6.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F58B6.3b.1:c.392+51G>A | ||||
Intron_number | 5/11 | ||||
F58B6.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F58B6.3d.1:c.530+51G>A | ||||
Intron_number | 6/10 | ||||
F58B6.3e.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F58B6.3e.2:c.-872+51G>A | ||||
Intron_number | 4/11 | ||||
F58B6.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F58B6.3a.1:c.530+51G>A | ||||
Intron_number | 6/12 | ||||
F58B6.3e.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F58B6.3e.3:c.-872+51G>A | ||||
Intron_number | 3/10 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw38176 | ||||
Method | WGS_Hawaiian_Waterston |