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WormBase Tree Display for Variation: WBVar00035268

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Name Class

WBVar00035268EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00035268
Other_namehaw38176
cewivar00192938
F58B6.3e.2:c.-872+51G>A
F58B6.3d.1:c.530+51G>A
F58B6.3a.1:c.530+51G>A
F58B6.3e.3:c.-872+51G>A
F58B6.3e.1:c.-872+51G>A
F58B6.3b.1:c.392+51G>A
HGVSgCHROMOSOME_III:g.1084512G>A
Sequence_detailsSMapS_parentSequenceF58B6
Flanking_sequencesaaaggctgaaaatctggaaatttcactaaaaatatggaaaaatcgctgaa
Mapping_targetF58B6
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01390575
StatusLive
AffectsGeneWBGene00003917
TranscriptF58B6.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3e.1:c.-872+51G>A
Intron_number5/12
F58B6.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3b.1:c.392+51G>A
Intron_number5/11
F58B6.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3d.1:c.530+51G>A
Intron_number6/10
F58B6.3e.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3e.2:c.-872+51G>A
Intron_number4/11
F58B6.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3a.1:c.530+51G>A
Intron_number6/12
F58B6.3e.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF58B6.3e.3:c.-872+51G>A
Intron_number3/10
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw38176
MethodWGS_Hawaiian_Waterston