WormBase Tree Display for Variation: WBVar00037158
expand all nodes | collapse all nodes | view schema
WBVar00037158 | Name | Public_name | WBVar00037158 | ||
---|---|---|---|---|---|
Other_name | haw38554 | ||||
cewivar00193172 | |||||
CE39196:p.Trp12Ter | |||||
Y82E9BL.7.1:c.36G>A | |||||
HGVSg | CHROMOSOME_III:g.1342459C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y82E9BL | |
Flanking_sequences | tttgacgatttgatgaactagaaat | cattttggtagtatgtcaatgaagc | |||
Mapping_target | Y82E9BL | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00022324 | |||
Transcript | Y82E9BL.7.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | Y82E9BL.7.1:c.36G>A | ||||
HGVSp | CE39196:p.Trp12Ter | ||||
cDNA_position | 64 | ||||
CDS_position | 36 | ||||
Protein_position | 12 | ||||
Exon_number | 2/6 | ||||
Codon_change | tgG/tgA | ||||
Amino_acid_change | W/* | ||||
Remark | [20081124 db] this Variation was previously named hw38554 | ||||
Method | WGS_Hawaiian_Waterston |