WormBase Tree Display for Variation: WBVar00037205
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WBVar00037205 | Name | Public_name | WBVar00037205 | ||
---|---|---|---|---|---|
Other_name | haw88539 | ||||
cewivar00252105 | |||||
T08G3.8.1:c.*130T>A | |||||
T08G3.7:n.3367A>T | |||||
HGVSg | CHROMOSOME_V:g.16466336A>T | ||||
Sequence_details | SMap | S_parent | Sequence | T08G3 | |
Flanking_sequences | aagatactcgtgaaacatcgattac | gttttgaaagatcatgaataaagat | |||
Mapping_target | T08G3 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00011619 | |||
WBGene00005707 | |||||
Transcript | T08G3.8.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T08G3.8.1:c.*130T>A | ||||
cDNA_position | 1072 | ||||
Exon_number | 5/5 | ||||
Pseudogene | T08G3.7 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T08G3.7:n.3367A>T | ||||
cDNA_position | 3367 | ||||
Exon_number | 10/10 | ||||
Remark | [20081124 db] this Variation was previously named hw88539 | ||||
Method | WGS_Hawaiian_Waterston |