WormBase Tree Display for Variation: WBVar00039088

WBVar00039088 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00039088
    Other_name: haw38940
      haw140505
      cewivar00193912
      Y82E9BR.17b.1:c.-774-198C>T
      Y82E9BR.17b.2:c.-773-198C>T
      Y82E9BR.17a.1:c.421-198C>T
    HGVSg: CHROMOSOME_III:g.1453371G>A
  Sequence_details: SMap: S_parent: Sequence: Y82E9BR
    Flanking_sequences: taaccgttttttcctaaactttttg gggactgatttaaaaggttttcttc
    Mapping_target: Y82E9BR
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00560370
    Status: Live
  Affects: Gene: WBGene00022349
      WBGene00305908
    Transcript: Y82E9BR.17a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y82E9BR.17a.1:c.421-198C>T
        Intron_number: 5/16
      Y82E9BR.33
      Y82E9BR.17b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y82E9BR.17b.2:c.-773-198C>T
        Intron_number: 3/14
      Y82E9BR.17b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y82E9BR.17b.1:c.-774-198C>T
        Intron_number: 4/15
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw38940
  Method: WGS_Hawaiian_Waterston