WormBase Tree Display for Variation: WBVar00041470
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WBVar00041470 | Name | Public_name | WBVar00041470 | ||
---|---|---|---|---|---|
Other_name | haw89392 | ||||
haw174485 | |||||
cewivar00253838 | |||||
T25E12.4e.1:c.1510+94T>A | |||||
T25E12.4d.1:c.850+94T>A | |||||
F14D1.3:n.47T>A | |||||
T25E12.4f.1:c.1516+94T>A | |||||
T25E12.4c.1:c.922+94T>A | |||||
T25E12.4a.1:c.1516+94T>A | |||||
HGVSg | CHROMOSOME_V:g.16766794T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F14D1 | |
Flanking_sequences | ctgaaaaaaaatttttttttggata | tctaaaaaatatttccaaaacaaca | |||
Mapping_target | F14D1 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (11) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00594350 | |||
WBVar01275059 | |||||
Status | Live | ||||
Affects | Gene | WBGene00198164 | |||
WBGene00012019 | |||||
Transcript | T25E12.4f.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4f.1:c.1516+94T>A | ||||
Intron_number | 10/18 | ||||
F14D1.3 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F14D1.3:n.47T>A | ||||
cDNA_position | 47 | ||||
Exon_number | 1/1 | ||||
T25E12.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4d.1:c.850+94T>A | ||||
Intron_number | 6/13 | ||||
T25E12.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4c.1:c.922+94T>A | ||||
Intron_number | 6/13 | ||||
T25E12.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4a.1:c.1516+94T>A | ||||
Intron_number | 10/18 | ||||
T25E12.4e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4e.1:c.1510+94T>A | ||||
Intron_number | 10/17 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw89392 | ||||
Method | WGS_Hawaiian_Waterston |