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WormBase Tree Display for Variation: WBVar00041470

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Name Class

WBVar00041470NamePublic_nameWBVar00041470
Other_namehaw89392
haw174485
cewivar00253838
T25E12.4e.1:c.1510+94T>A
T25E12.4d.1:c.850+94T>A
F14D1.3:n.47T>A
T25E12.4f.1:c.1516+94T>A
T25E12.4c.1:c.922+94T>A
T25E12.4a.1:c.1516+94T>A
HGVSgCHROMOSOME_V:g.16766794T>A
Sequence_detailsSMapS_parentSequenceF14D1
Flanking_sequencesctgaaaaaaaatttttttttggatatctaaaaaatatttccaaaacaaca
Mapping_targetF14D1
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00594350
WBVar01275059
StatusLive
AffectsGeneWBGene00198164
WBGene00012019
TranscriptT25E12.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4f.1:c.1516+94T>A
Intron_number10/18
F14D1.3VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScF14D1.3:n.47T>A
cDNA_position47
Exon_number1/1
T25E12.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4d.1:c.850+94T>A
Intron_number6/13
T25E12.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4c.1:c.922+94T>A
Intron_number6/13
T25E12.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4a.1:c.1516+94T>A
Intron_number10/18
T25E12.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4e.1:c.1510+94T>A
Intron_number10/17
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw89392
MethodWGS_Hawaiian_Waterston