WormBase Tree Display for Variation: WBVar00041575

WBVar00041575 Name: Public_name: WBVar00041575
    Other_name: haw89413
      haw174503
      cewivar00253869
      T25E12.4f.1:c.2176+2185C>T
      T25E12.4a.1:c.2101+2185C>T
      T25E12.4d.1:c.1435+2185C>T
      T25E12.4e.1:c.2095+2185C>T
      T25E12.4c.1:c.1507+2185C>T
    HGVSg: CHROMOSOME_V:g.16771996C>T
  Sequence_details: SMap: S_parent: Sequence: F14D1
    Flanking_sequences: tagaaaaaatggaggggtgaaacct ttgaagcagcaaaaggttttctgta
    Mapping_target: F14D1
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (19)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00594368
        WBVar01275078
    Status: Live
  Affects: Gene: WBGene00012019
    Transcript: T25E12.4f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25E12.4f.1:c.2176+2185C>T
        Intron_number: 15/18
      T25E12.4d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25E12.4d.1:c.1435+2185C>T
        Intron_number: 10/13
      T25E12.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25E12.4c.1:c.1507+2185C>T
        Intron_number: 10/13
      T25E12.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25E12.4a.1:c.2101+2185C>T
        Intron_number: 14/18
      T25E12.4e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25E12.4e.1:c.2095+2185C>T
        Intron_number: 14/17
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw89413
  Method: WGS_Hawaiian_Waterston