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WormBase Tree Display for Variation: WBVar00041610

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Name Class

WBVar00041610EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00041610
Other_namehaw89420
cewivar00253881
T25E12.4f.1:c.2176+5432A>T
T25E12.4a.1:c.2101+5432A>T
T25E12.4e.1:c.2095+5432A>T
T25E12.4d.1:c.1435+5432A>T
T25E12.4c.1:c.1507+5432A>T
HGVSgCHROMOSOME_V:g.16775243A>T
Sequence_detailsSMapS_parentSequenceF14D1
Flanking_sequencescattttttggaaaaccaattttcacaggtttatatgtagttttttttctc
Mapping_targetF14D1
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01275089
StatusLive
AffectsGeneWBGene00012019
TranscriptT25E12.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4f.1:c.2176+5432A>T
Intron_number15/18
T25E12.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4d.1:c.1435+5432A>T
Intron_number10/13
T25E12.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4c.1:c.1507+5432A>T
Intron_number10/13
T25E12.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4a.1:c.2101+5432A>T
Intron_number14/18
T25E12.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4e.1:c.2095+5432A>T
Intron_number14/17
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw89420
MethodWGS_Hawaiian_Waterston