WormBase Tree Display for Variation: WBVar00041610
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WBVar00041610 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00041610 | |||
Other_name | haw89420 | ||||
cewivar00253881 | |||||
T25E12.4f.1:c.2176+5432A>T | |||||
T25E12.4a.1:c.2101+5432A>T | |||||
T25E12.4e.1:c.2095+5432A>T | |||||
T25E12.4d.1:c.1435+5432A>T | |||||
T25E12.4c.1:c.1507+5432A>T | |||||
HGVSg | CHROMOSOME_V:g.16775243A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F14D1 | |
Flanking_sequences | cattttttggaaaaccaattttcac | aggtttatatgtagttttttttctc | |||
Mapping_target | F14D1 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01275089 | |||
Status | Live | ||||
Affects | Gene | WBGene00012019 | |||
Transcript | T25E12.4f.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4f.1:c.2176+5432A>T | ||||
Intron_number | 15/18 | ||||
T25E12.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4d.1:c.1435+5432A>T | ||||
Intron_number | 10/13 | ||||
T25E12.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4c.1:c.1507+5432A>T | ||||
Intron_number | 10/13 | ||||
T25E12.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4a.1:c.2101+5432A>T | ||||
Intron_number | 14/18 | ||||
T25E12.4e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4e.1:c.2095+5432A>T | ||||
Intron_number | 14/17 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw89420 | ||||
Method | WGS_Hawaiian_Waterston |