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WormBase Tree Display for Variation: WBVar00041615

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Name Class

WBVar00041615NamePublic_nameWBVar00041615
Other_namehaw89421
haw174510
cewivar00253887
T25E12.4e.1:c.2095+6227A>G
T25E12.4c.1:c.1507+6227A>G
T25E12.4f.1:c.2176+6227A>G
T25E12.4a.1:c.2101+6227A>G
T25E12.4d.1:c.1435+6227A>G
HGVSgCHROMOSOME_V:g.16776038A>G
Sequence_detailsSMapS_parentSequenceF14D1
Flanking_sequencesctctgaaaataaacaacaaaatcgtaaaaagggcgatattttgttgtttt
Mapping_targetF14D1
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01275093
WBVar00594375
StatusLive
AffectsGeneWBGene00012019
TranscriptT25E12.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4f.1:c.2176+6227A>G
Intron_number15/18
T25E12.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4d.1:c.1435+6227A>G
Intron_number10/13
T25E12.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4c.1:c.1507+6227A>G
Intron_number10/13
T25E12.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4a.1:c.2101+6227A>G
Intron_number14/18
T25E12.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4e.1:c.2095+6227A>G
Intron_number14/17
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw89421
MethodWGS_Hawaiian_Waterston