WormBase Tree Display for Variation: WBVar00041735
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WBVar00041735 | Name | Public_name | WBVar00041735 | ||
---|---|---|---|---|---|
Other_name | haw89445 | ||||
cewivar00253929 | |||||
T25E12.4e.1:c.2240-356T>A | |||||
T25E12.4d.1:c.1580-356T>A | |||||
T25E12.4c.1:c.1652-356T>A | |||||
T25E12.4a.1:c.2246-356T>A | |||||
T25E12.4b.1:c.641-356T>A | |||||
T25E12.4f.1:c.2321-356T>A | |||||
HGVSg | CHROMOSOME_V:g.16785915T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y70C5D | |
Flanking_sequences | gacaattattttttatttctttttt | tttctgatcttcacgtttctcgccc | |||
Mapping_target | Y70C5D | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00012019 | |||
Transcript | T25E12.4f.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4f.1:c.2321-356T>A | ||||
Intron_number | 16/18 | ||||
T25E12.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4d.1:c.1580-356T>A | ||||
Intron_number | 11/13 | ||||
T25E12.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4c.1:c.1652-356T>A | ||||
Intron_number | 11/13 | ||||
T25E12.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4b.1:c.641-356T>A | ||||
Intron_number | 3/5 | ||||
T25E12.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4a.1:c.2246-356T>A | ||||
Intron_number | 15/18 | ||||
T25E12.4e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T25E12.4e.1:c.2240-356T>A | ||||
Intron_number | 15/17 | ||||
Remark | [20081124 db] this Variation was previously named hw89445 | ||||
Method | WGS_Hawaiian_Waterston |