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WormBase Tree Display for Variation: WBVar00041735

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Name Class

WBVar00041735NamePublic_nameWBVar00041735
Other_namehaw89445
cewivar00253929
T25E12.4e.1:c.2240-356T>A
T25E12.4d.1:c.1580-356T>A
T25E12.4c.1:c.1652-356T>A
T25E12.4a.1:c.2246-356T>A
T25E12.4b.1:c.641-356T>A
T25E12.4f.1:c.2321-356T>A
HGVSgCHROMOSOME_V:g.16785915T>A
Sequence_detailsSMapS_parentSequenceY70C5D
Flanking_sequencesgacaattattttttatttctttttttttctgatcttcacgtttctcgccc
Mapping_targetY70C5D
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00012019
TranscriptT25E12.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4f.1:c.2321-356T>A
Intron_number16/18
T25E12.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4d.1:c.1580-356T>A
Intron_number11/13
T25E12.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4c.1:c.1652-356T>A
Intron_number11/13
T25E12.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4b.1:c.641-356T>A
Intron_number3/5
T25E12.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4a.1:c.2246-356T>A
Intron_number15/18
T25E12.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4e.1:c.2240-356T>A
Intron_number15/17
Remark[20081124 db] this Variation was previously named hw89445
MethodWGS_Hawaiian_Waterston