WormBase Tree Display for Variation: WBVar00042243

WBVar00042243 Name: Public_name: WBVar00042243
    Other_name: snp_Y39A3CL[4]
      haw39571
      haw140926
      cewivar00148292
      Y39A3CL.2.2:c.1114+97T>A
      Y39A3CL.2.1:c.1114+97T>A
    HGVSg: CHROMOSOME_III:g.1795490T>A
  Sequence_details: SMap: S_parent: Sequence: Y39A3CL
    Flanking_sequences: tttggttaaaattcaaacttgtcaa ctttgtcaaatttcaagatttttcg
    Mapping_target: Y39A3CL
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (15)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00560791
        WBVar01258247
        WBVar00247030
    Status: Live
  Affects: Gene: WBGene00006513
    Transcript: Y39A3CL.2.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39A3CL.2.2:c.1114+97T>A
        Intron_number: 8/20
      Y39A3CL.2.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39A3CL.2.1:c.1114+97T>A
        Intron_number: 9/21
  Reference: WBPaper00038208
    WBPaper00004703
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw39571
  Method: WGS_Hawaiian_Waterston