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WormBase Tree Display for Variation: WBVar00042283

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Name Class

WBVar00042283NamePublic_nameWBVar00042283
Other_namehaw39579
cewivar00194416
Y39A3CL.2.1:c.1114+1150G>C
Y39A3CL.2.2:c.1114+1150G>C
HGVSgCHROMOSOME_III:g.1796543G>C
Sequence_detailsSMapS_parentSequenceY39A3CL
Flanking_sequencestttttaaaggtttttgtcaactttgggttattataataaactacaactgt
Mapping_targetY39A3CL
Type_of_mutationSubstitutionGC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006513
TranscriptY39A3CL.2.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A3CL.2.2:c.1114+1150G>C
Intron_number8/20
Y39A3CL.2.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A3CL.2.1:c.1114+1150G>C
Intron_number9/21
Remark[20081124 db] this Variation was previously named hw39579
MethodWGS_Hawaiian_Waterston