WormBase Tree Display for Variation: WBVar00042283
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WBVar00042283 | Name | Public_name | WBVar00042283 | ||
---|---|---|---|---|---|
Other_name | haw39579 | ||||
cewivar00194416 | |||||
Y39A3CL.2.1:c.1114+1150G>C | |||||
Y39A3CL.2.2:c.1114+1150G>C | |||||
HGVSg | CHROMOSOME_III:g.1796543G>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y39A3CL | |
Flanking_sequences | tttttaaaggtttttgtcaactttg | ggttattataataaactacaactgt | |||
Mapping_target | Y39A3CL | ||||
Type_of_mutation | Substitution | G | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006513 | |||
Transcript | Y39A3CL.2.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A3CL.2.2:c.1114+1150G>C | ||||
Intron_number | 8/20 | ||||
Y39A3CL.2.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A3CL.2.1:c.1114+1150G>C | ||||
Intron_number | 9/21 | ||||
Remark | [20081124 db] this Variation was previously named hw39579 | ||||
Method | WGS_Hawaiian_Waterston |