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WormBase Tree Display for Variation: WBVar00042308

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Name Class

WBVar00042308NamePublic_nameWBVar00042308
Other_namehaw39584
cewivar00194423
Y39A3CL.2.2:c.2012+215T>A
Y39A3CL.2.1:c.2012+215T>A
HGVSgCHROMOSOME_III:g.1802398T>A
Sequence_detailsSMapS_parentSequenceY39A3CL
Flanking_sequencestttttcaatttttttgtttttttttaattccaatttagtcagtttttgtt
Mapping_targetY39A3CL
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006513
TranscriptY39A3CL.2.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A3CL.2.2:c.2012+215T>A
Intron_number13/20
Y39A3CL.2.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A3CL.2.1:c.2012+215T>A
Intron_number14/21
Remark[20081124 db] this Variation was previously named hw39584
MethodWGS_Hawaiian_Waterston