WormBase Tree Display for Variation: WBVar00042575
expand all nodes | collapse all nodes | view schema
WBVar00042575 | Name | Public_name | WBVar00042575 | ||
---|---|---|---|---|---|
Other_name | haw89613 | ||||
cewivar00254212 | |||||
CE35642:p.Lys286= | |||||
Y102A5B.3.1:c.858G>A | |||||
HGVSg | CHROMOSOME_V:g.16850639C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y102A5B | |
Flanking_sequences | ccgctacgccaagtataatatgttc | ttcacattgtaaatggattgtacgt | |||
Mapping_target | Y102A5B | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00013609 | |||
Transcript | Y102A5B.3.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y102A5B.3.1:c.858G>A | ||||
HGVSp | CE35642:p.Lys286= | ||||
cDNA_position | 881 | ||||
CDS_position | 858 | ||||
Protein_position | 286 | ||||
Exon_number | 8/9 | ||||
Codon_change | aaG/aaA | ||||
Amino_acid_change | K | ||||
Remark | [20081124 db] this Variation was previously named hw89613 | ||||
Method | WGS_Hawaiian_Waterston |