WormBase Tree Display for Variation: WBVar00042695
expand all nodes | collapse all nodes | view schema
WBVar00042695 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00042695 | |||
Other_name | haw89637 | ||||
haw174670 | |||||
cewivar00254307 | |||||
F49A5.2.1:c.567G>A | |||||
CE46615:p.Arg189= | |||||
HGVSg | CHROMOSOME_V:g.16857093C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F49A5 | |
Flanking_sequences | tatagacaagattagtatccgtaga | cgactttccagatcccaattacaag | |||
Mapping_target | F49A5 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00594535 | |||
Status | Live | ||||
Affects | Gene | WBGene00009854 | |||
Transcript | F49A5.2.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F49A5.2.1:c.567G>A | ||||
HGVSp | CE46615:p.Arg189= | ||||
cDNA_position | 689 | ||||
CDS_position | 567 | ||||
Protein_position | 189 | ||||
Exon_number | 6/9 | ||||
Codon_change | cgG/cgA | ||||
Amino_acid_change | R | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw89637 | ||||
Method | WGS_Hawaiian_Waterston |