WormBase Tree Display for Variation: WBVar00043102
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WBVar00043102 | Name | Public_name | WBVar00043102 | ||
---|---|---|---|---|---|
Other_name | cbv41448 | ||||
HGVSg | chrII:g.627025C>T | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc0022b | |
Flanking_sequences | tcagaatctcagaatctcagaatct | agaatctcagaatctcagaatctca | |||
Mapping_target | cb25.fpc0022b | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00042094 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00024236 | |||
WBGene00024238 | |||||
Transcript | CBG00928.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | CBG00928.1:c.1395+9546G>A | ||||
Intron_number | 8/22 | ||||
CBG00930.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | CBG00930.1:c.37C>T | ||||
HGVSp | CBP05856.1:p.Gln13Ter | ||||
cDNA_position | 37 | ||||
CDS_position | 37 | ||||
Protein_position | 13 | ||||
Exon_number | 1/1 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
Method | SNP |