WormBase Tree Display for Variation: WBVar00043733
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| WBVar00043733 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00043733 | |||
| Other_name | haw39869 | ||||
| haw141150 | |||||
| cewivar00148508 | |||||
| F53A3.4b.1:c.1770+333T>A | |||||
| F53A3.4c.1:c.1770+333T>A | |||||
| F53A3.4a.1:c.1770+333T>A | |||||
| HGVSg | CHROMOSOME_III:g.1911651T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | B0524 | |
| Flanking_sequences | cgaatttcatactaagaaatctgtg | aagttgacatttgagacgaaaattt | |||
| Mapping_target | B0524 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00561015 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00004128 | |||
| Transcript | F53A3.4c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F53A3.4c.1:c.1770+333T>A | ||||
| Intron_number | 8/16 | ||||
| F53A3.4b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F53A3.4b.1:c.1770+333T>A | ||||
| Intron_number | 8/23 | ||||
| F53A3.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F53A3.4a.1:c.1770+333T>A | ||||
| Intron_number | 9/23 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw39869 | ||||
| Method | WGS_Hawaiian_Waterston |
