WormBase Tree Display for Variation: WBVar00043750
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WBVar00043750 | Name | Public_name | WBVar00043750 | ||
---|---|---|---|---|---|
Other_name | haw89848 | ||||
haw174838 | |||||
cewivar00254853 | |||||
CE20387:p.Leu272= | |||||
Y102A5C.15.1:c.816G>C | |||||
HGVSg | CHROMOSOME_V:g.16953955C>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y102A5C | |
Flanking_sequences | tgatcattccttgattataatacgc | agaaaaaatgcaaatataaaataga | |||
Mapping_target | Y102A5C | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00594703 | |||
WBVar01275738 | |||||
Status | Live | ||||
Affects | Gene | WBGene00005416 | |||
Transcript | Y102A5C.15.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y102A5C.15.1:c.816G>C | ||||
HGVSp | CE20387:p.Leu272= | ||||
cDNA_position | 816 | ||||
CDS_position | 816 | ||||
Protein_position | 272 | ||||
Exon_number | 3/3 | ||||
Codon_change | ctG/ctC | ||||
Amino_acid_change | L | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw89848 | ||||
Method | WGS_Hawaiian_Waterston |