WormBase Tree Display for Variation: WBVar00043890
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WBVar00043890 | Name | Public_name | WBVar00043890 | ||
---|---|---|---|---|---|
Other_name | haw89876 | ||||
cewivar00254945 | |||||
CE20390:p.Ala309= | |||||
Y102A5C.18.1:c.927G>A | |||||
HGVSg | CHROMOSOME_V:g.16959054C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y102A5C | |
Flanking_sequences | ccggtggtggctccagatgcttcat | gctgggactgaaaaaattggaaaag | |||
Mapping_target | Y102A5C | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001161 | |||
Transcript | Y102A5C.18.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y102A5C.18.1:c.927G>A | ||||
HGVSp | CE20390:p.Ala309= | ||||
cDNA_position | 929 | ||||
CDS_position | 927 | ||||
Protein_position | 309 | ||||
Exon_number | 8/9 | ||||
Codon_change | gcG/gcA | ||||
Amino_acid_change | A | ||||
Remark | [20081124 db] this Variation was previously named hw89876 | ||||
Method | WGS_Hawaiian_Waterston |