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WormBase Tree Display for Variation: WBVar00044380

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Name Class

WBVar00044380EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00044380
Other_namehaw89974
cewivar00255096
Y102A5C.29.1:c.376-3C>T
HGVSgCHROMOSOME_V:g.17002588C>T
Sequence_detailsSMapS_parentSequenceY102A5C
Flanking_sequencestaaaaaaaactttcacaacaaattgagaacagcaactcaagcaccaaata
Mapping_targetY102A5C
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01275929
StatusLive
AffectsGeneWBGene00005521
TranscriptY102A5C.29.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScY102A5C.29.1:c.376-3C>T
Intron_number2/6
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw89974
MethodWGS_Hawaiian_Waterston