WormBase Tree Display for Variation: WBVar00044790
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| WBVar00044790 | Name | Public_name | WBVar00044790 | ||
|---|---|---|---|---|---|
| Other_name | uCE5-2512 | ||||
| haw90056 | |||||
| haw175009 | |||||
| cewivar00255237 | |||||
| T05E12.7c.1:c.217C>T | |||||
| CE16350:p.Gln266Ter | |||||
| CE47752:p.Gln73Ter | |||||
| T05E12.7a.1:c.796C>T | |||||
| HGVSg | CHROMOSOME_V:g.17091492C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | ZK218 | |
| Flanking_sequences | tatatcatttgtattttttcatcat | aaaatcaatttcacaataatttgat | |||
| Mapping_target | ZK218 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| History | Acquires_merge | WBVar01276047 | |||
| WBVar00273053 | |||||
| WBVar00594874 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00005444 | |||
| Transcript | T05E12.7a.1 | VEP_consequence | stop_gained | ||
| VEP_impact | HIGH | ||||
| HGVSc | T05E12.7a.1:c.796C>T | ||||
| HGVSp | CE16350:p.Gln266Ter | ||||
| cDNA_position | 807 | ||||
| CDS_position | 796 | ||||
| Protein_position | 266 | ||||
| Exon_number | 5/6 | ||||
| Codon_change | Caa/Taa | ||||
| Amino_acid_change | Q/* | ||||
| T05E12.7c.1 | VEP_consequence | stop_gained | |||
| VEP_impact | HIGH | ||||
| HGVSc | T05E12.7c.1:c.217C>T | ||||
| HGVSp | CE47752:p.Gln73Ter | ||||
| cDNA_position | 217 | ||||
| CDS_position | 217 | ||||
| Protein_position | 73 | ||||
| Exon_number | 2/2 | ||||
| Codon_change | Caa/Taa | ||||
| Amino_acid_change | Q/* | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Remark | [20081124 db] this Variation was previously named hw90056 | ||||
| Method | WGS_Hawaiian_Waterston |
