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WormBase Tree Display for Variation: WBVar00045438

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Name Class

WBVar00045438NamePublic_nameWBVar00045438
Other_namehaw40210
haw141382
Y48G9A.4a.1:c.1713+583G>A
Y48G9A.4b.1:c.1968+583G>A
HGVSgCHROMOSOME_III:g.2144372G>A
Sequence_detailsSMapS_parentSequenceY48G9A
Flanking_sequencesgagttttttggccgaaaaaaaccagaaaatttcaattttcccctgaaaagccataaaaat
Mapping_targetY48G9A
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00022850From_analysisWGS_De_Bono
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
HistoryAcquires_mergeWBVar00561247
WBVar01326996
WBVar01258939
StatusLive
AffectsGeneWBGene00021698
TranscriptY48G9A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G9A.4b.1:c.1968+583G>A
Intron_number10/15
Y48G9A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G9A.4a.1:c.1713+583G>A
Intron_number7/12
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw40210
MethodWGS_Hawaiian_Waterston